STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ25536.1COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (328 aa)    
Predicted Functional Partners:
EAQ25534.1
Hypothetical protein; COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
  
     0.708
EAQ25531.1
Putative transketolase beta subunit protein; COG3958 Transketolase, C-terminal subunit.
  
     0.638
EAQ25530.1
Putative transketolase alpha subunit protein; COG3959 Transketolase, N-terminal subunit.
  
     0.632
EAQ26444.1
Putative gstR-like transcriptional regulator protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.618
EAQ25613.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.609
EAQ25537.1
Glycine betaine/proline ABC transporter, ATP-binding protein; COG4175 ABC-type proline/glycine betaine transport system, ATPase component.
       0.513
EAQ25538.1
COG4176 ABC-type proline/glycine betaine transport system, permease component.
       0.500
EAQ26069.1
LysR family transcriptional regulatory protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.461
EAQ26394.1
Regulatory protein, LysR:LysR, substrate-binding; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.440
EAQ25891.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.439
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
Server load: medium (56%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.