Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ25542.1Renal dipeptidase family protein; COG2355 Zn-dependent dipeptidase, microsomal dipeptidase homolog. (334 aa)    
Predicted Functional Partners:
EAQ25544.1
COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family.
 
    0.960
EAQ25541.1
Hypothetical protein.
 
     0.932
EAQ25540.1
Hypothetical protein.
 
     0.870
EAQ25543.1
COG1012 NAD-dependent aldehyde dehydrogenases.
 
     0.849
EAQ23031.1
COG2055 Malate/L-lactate dehydrogenases; Belongs to the LDH2/MDH2 oxidoreductase family.
  
    0.801
EAQ24144.1
COG2071 Predicted glutamine amidotransferases.
      0.798
EAQ25545.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
    0.716
EAQ24059.1
Bacteriochlorophyll synthase, 23 kDa subunit (bchJ).
  
  
 0.578
EAQ25539.1
Amino acid ABC transporter, periplasmic amino acid-binding protein; COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components.
  
    0.475
EAQ25546.1
Mandelate racemase/muconate lactonizing enzyme family protein; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
   
 0.471
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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