Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ25548.1Hypothetical protein; COG0665 Glycine/D-amino acid oxidases (deaminating). (421 aa)    
Predicted Functional Partners:
EAQ25549.1
COG0687 Spermidine/putrescine-binding periplasmic protein.
 
     0.871
EAQ24950.1
Sarcosine oxidase, alpha subunit family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
  
 0.805
EAQ26649.1
Sarcosine oxidase, alpha subunit family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
  
 0.805
EAQ23136.1
Sarcosine oxidase, alpha subunit family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
  
 0.805
gcvP
Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
 0.751
EAQ24514.1
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
  
 
 0.733
EAQ25552.1
COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
     0.707
EAQ25551.1
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
    0.625
EAQ25112.1
N-methylproline demethylase, putative; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
 0.612
EAQ25840.1
COG0174 Glutamine synthetase.
 
 
  0.586
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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