Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-expression
Experiments
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[Homology]
Score
EAQ25618.1Hypothetical protein; COG0384 Predicted epimerase, PhzC/PhzF homolog. (56 aa)    
Predicted Functional Partners:
EAQ25619.1
Hypothetical protein; COG0384 Predicted epimerase, PhzC/PhzF homolog.
 
     0.899
EAQ25617.1
COG3051 Citrate lyase, alpha subunit.
       0.610
EAQ24160.1
Phenazine biosynthesis protein, PhzF family protein; COG0384 Predicted epimerase, PhzC/PhzF homolog.
  
     0.582
EAQ25616.1
CaiB/BaiF family protein; COG1804 Predicted acyl-CoA transferases/carnitine dehydratase; Belongs to the CoA-transferase III family.
  
    0.580
EAQ25620.1
COG3333 Uncharacterized protein conserved in bacteria.
       0.570
EAQ26019.1
Hypothetical protein; COG0384 Predicted epimerase, PhzC/PhzF homolog.
  
     0.476
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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