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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAQ23566.1Hypothetical protein; COG0126 3-phosphoglycerate kinase. (222 aa)    
Predicted Functional Partners:
EAQ23560.1
Hypothetical protein; COG2378 Predicted transcriptional regulator.
       0.559
EAQ23561.1
RNA polymerase sigma subunit; COG0666 FOG: Ankyrin repeat; Belongs to the sigma-70 factor family.
       0.559
EAQ23562.1
Hypothetical protein; COG0323 DNA mismatch repair enzyme (predicted ATPase).
       0.559
EAQ23563.1
Endonuclease.
       0.559
EAQ23564.1
Hypothetical protein.
       0.559
EAQ23565.1
Hypothetical protein.
       0.559
EAQ23567.1
Hypothetical protein.
       0.538
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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