STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ23581.1Hypothetical protein; COG1533 DNA repair photolyase. (312 aa)    
Predicted Functional Partners:
EAQ23580.1
Probable DNA polymerase III (epsilon chain) protein; COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases.
       0.817
EAQ23579.1
Hypothetical protein; COG0352 Thiamine monophosphate synthase.
       0.678
EAQ23582.1
Hypothetical protein.
       0.571
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.