Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ23593.1ISPsy20, transposase IstB; COG1484 DNA replication protein. (242 aa)    
Predicted Functional Partners:
EAQ23592.1
ISPsy20, transposase IstA; COG4584 Transposase and inactivated derivatives.
 
   0.912
EAQ27155.1
Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.
  
 0.912
EAQ23915.1
ISPsy20, transposase IstA; COG4584 Transposase and inactivated derivatives.
 
   0.785
EAQ24185.1
ISPsy20, transposase IstA; COG4584 Transposase and inactivated derivatives.
 
   0.784
EAQ26043.1
ISPsy20, transposase IstA; COG4584 Transposase and inactivated derivatives.
 
   0.784
EAQ25875.1
ISPsy20, transposase IstA; COG4584 Transposase and inactivated derivatives.
 
   0.783
EAQ24936.1
ISPsy20, transposase IstA; COG4584 Transposase and inactivated derivatives.
 
   0.783
EAQ24503.1
ISPsy20, transposase IstA; COG4584 Transposase and inactivated derivatives.
 
   0.782
EAQ24186.1
ISPsy20, transposase IstA; COG4584 Transposase and inactivated derivatives.
 
   0.726
dnaG
DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.
  
 
 0.702
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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