Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAQ23606.1COG5469 Predicted metal-binding protein. (109 aa)    
Predicted Functional Partners:
EAQ23607.1
cobW protein, putative; COG0523 Putative GTPases (G3E family).
 
    0.685
EAQ23608.1
COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
       0.563
EAQ23604.1
Membrane protein, putative; COG5446 Predicted integral membrane protein.
 
    0.558
EAQ23603.1
Hypothetical protein.
 
    0.522
EAQ27258.1
Cobalamin biosynthetic protein CobC; COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase.
 
     0.421
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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