STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ23615.1Peptide ABC transporter, ATP-binding protein; COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily. (563 aa)    
Predicted Functional Partners:
EAQ23616.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.975
EAQ23617.1
Hypothetical protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.973
EAQ23477.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.911
EAQ23618.1
Hypothetical protein; COG0747 ABC-type dipeptide transport system, periplasmic component.
 
 
 0.905
EAQ26523.1
Peptide/nickel/opine uptake family ABC transporter, permease protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.896
EAQ23478.1
Hypothetical ABC transporter, permease protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.884
EAQ25850.1
Hypothetical protein; COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.860
EAQ26483.1
COG0747 ABC-type dipeptide transport system, periplasmic component.
 
 
 0.846
EAQ26524.1
Peptide/nickel/opine uptake family ABC transporter, permease protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 
 0.804
EAQ25851.1
Hypothetical protein; COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.796
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.