STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ23668.1Geranylgeranyl reductase; COG0644 Dehydrogenases (flavoproteins). (386 aa)    
Predicted Functional Partners:
EAQ27283.1
Putative bacteriochlorophyll synthase, 34 kDa subunit; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases.
 
 
 0.979
EAQ27282.1
Putative light-harvesting 1 (B870) complex assembly protein PucC; COG0477 Permeases of the major facilitator superfamily.
 
    0.900
EAQ27317.1
Squalene/phytoene synthase; COG1562 Phytoene/squalene synthetase.
  
 
 0.898
bchB
Light-independent protochlorophyllide reductase; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.
 
  
 0.871
EAQ27313.1
COG0142 Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
 
 0.789
EAQ23669.1
Transcriptional regulator, AsnC family protein; COG1522 Transcriptional regulators.
       0.783
EAQ27111.1
Hypothetical protein; COG1562 Phytoene/squalene synthetase.
  
 
 0.738
ubiA
4-hydroxybenzoate polyprenyl transferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.
  
 
 0.738
bchN
Light-independent protochlorophyllide reductase; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (BchN-BchB) is the catalytic component of the complex.
 
  
 0.729
EAQ26887.1
Farnesyl diphosphate synthase; COG0142 Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 0.719
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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