Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ24361.1GDSL-like lipase/acylhydrolase, putative; COG0031 Cysteine synthase. (251 aa)    
Predicted Functional Partners:
EAQ25801.1
COG3210 Large exoproteins involved in heme utilization or adhesion.
   
 0.669
EAQ24295.1
Hypothetical protein.
   
 0.669
EAQ23914.1
Type I secretion target repeat protein; COG3210 Large exoproteins involved in heme utilization or adhesion.
   
 0.669
EAQ25053.1
Hypothetical protein; COG1196 Chromosome segregation ATPases.
   
 0.669
EAQ25120.1
Hypothetical protein.
  
 0.651
EAQ23231.1
Uncharacterized phage protein (possible DNA packaging).
  
 0.651
EAQ24360.1
ABC transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
    0.569
EAQ27164.1
Hypothetical protein.
 
  0.567
EAQ24359.1
COG0842 ABC-type multidrug transport system, permease component.
       0.565
EAQ23188.1
ABC transporter, permease protein; COG3127 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component.
   
   0.548
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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