Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ24371.1Probable secreted protein containing HslJ-like protein; COG3126 Uncharacterized protein conserved in bacteria. (411 aa)    
Predicted Functional Partners:
EAQ24024.1
COG1652 Uncharacterized protein containing LysM domain.
 
    0.815
EAQ23131.1
Possible peptidoglycan binding protein; COG1652 Uncharacterized protein containing LysM domain.
  
    0.765
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II, putative; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
     
 0.627
EAQ25967.1
Hypothetical protein.
  
     0.581
EAQ24370.1
COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
       0.573
EAQ24369.1
Possible esterase/lipase/thioesterase; COG0657 Esterase/lipase.
       0.561
EAQ27293.1
COG3861 Uncharacterized protein conserved in bacteria.
   
   0.554
EAQ24074.1
Putative exonuclease; COG0642 Signal transduction histidine kinase.
 
  
  0.550
EAQ27304.1
PufL, Photosynthetic reaction center L subunit.
    
   0.535
EAQ27305.1
LHI alpha, Light-harvesting B875 protein; Antenna complexes are light-harvesting systems, which transfer the excitation energy to the reaction centers.
    
   0.535
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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