Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ24373.1Hypothetical protein; COG3591 V8-like Glu-specific endopeptidase; Belongs to the peptidase S1B family. (270 aa)    
Predicted Functional Partners:
EAQ24374.1
Trypsin domain protein; COG5640 Secreted trypsin-like serine protease; Belongs to the peptidase S1B family.
 
    
0.808
EAQ24375.1
Glycolate oxidase, iron-sulfur subunit; COG0247 Fe-S oxidoreductase.
       0.666
EAQ24376.1
Glycolate oxidase, GlcE subunit; COG0277 FAD/FMN-containing dehydrogenases.
       0.632
EAQ24372.1
COG0071 Molecular chaperone (small heat shock protein); Belongs to the small heat shock protein (HSP20) family.
       0.587
EAQ26734.1
Hypothetical protein; COG3221 ABC-type phosphate/phosphonate transport system, periplasmic component.
  
    0.502
EAQ24114.1
Hypothetical protein.
  
    0.442
EAQ24377.1
Glycolate oxidase, GlcD subunit; COG0277 FAD/FMN-containing dehydrogenases.
       0.430
EAQ27191.1
COG1426 Uncharacterized protein conserved in bacteria.
  
     0.415
EAQ24387.1
Lipoprotein, putative; COG2812 DNA polymerase III, gamma/tau subunits.
  
     0.413
EAQ23939.1
Lipoprotein, putative; COG3087 Cell division protein.
 
     0.409
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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