Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
EAQ24378.1COG3821 Predicted membrane protein. (239 aa)    
Predicted Functional Partners:
EAQ24379.1
Hypothetical protein; COG0841 Cation/multidrug efflux pump.
 
     0.827
EAQ24376.1
Glycolate oxidase, GlcE subunit; COG0277 FAD/FMN-containing dehydrogenases.
       0.633
EAQ24375.1
Glycolate oxidase, iron-sulfur subunit; COG0247 Fe-S oxidoreductase.
       0.610
EAQ24377.1
Glycolate oxidase, GlcD subunit; COG0277 FAD/FMN-containing dehydrogenases.
       0.550
EAQ24373.1
Hypothetical protein; COG3591 V8-like Glu-specific endopeptidase; Belongs to the peptidase S1B family.
       0.403
EAQ24374.1
Trypsin domain protein; COG5640 Secreted trypsin-like serine protease; Belongs to the peptidase S1B family.
       0.403
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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