Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ24380.1Hypothetical protein. (682 aa)    
Predicted Functional Partners:
EAQ24381.1
Hypothetical protein.
 
     0.965
EAQ24382.1
Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).
 
     0.964
EAQ24383.1
ATPase, MoxR family protein; COG0714 MoxR-like ATPases.
 
     0.939
EAQ24384.1
COG3816 Uncharacterized protein conserved in bacteria.
 
     0.789
EAQ24303.1
Hypothetical protein; COG0443 Molecular chaperone.
  
     0.768
EAQ23508.1
DNA-binding protein, putative; COG1396 Predicted transcriptional regulators.
  
     0.662
EAQ26352.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
  
     0.652
EAQ26472.1
Hypothetical protein; COG1396 Predicted transcriptional regulators.
  
     0.528
EAQ26276.1
COG3786 Uncharacterized protein conserved in bacteria.
  
     0.524
EAQ25405.1
COG4765 Uncharacterized protein conserved in bacteria.
  
     0.477
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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