Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ24422.1COG0687 Spermidine/putrescine-binding periplasmic protein. (380 aa)    
Predicted Functional Partners:
EAQ24423.1
COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
  0.980
EAQ24424.1
COG1176 ABC-type spermidine/putrescine transport system, permease component I.
 
 
  0.964
potA-2
Spermidine/putrescine ABC transporter, ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  0.949
EAQ26815.1
ABC transporter, permease; COG1176 ABC-type spermidine/putrescine transport system, permease component I.
  
 0.900
EAQ24418.1
Acetyltransferase, GNAT family protein; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.
 
   
 0.894
EAQ24425.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.872
EAQ24420.1
Aminotransferase, class III; COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
     0.844
EAQ24417.1
Acetylpolyamine aminohydrolase; COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
 
  
 0.842
EAQ25757.1
Binding-protein-dependent transport systems inner membrane component; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
  0.811
EAQ25415.1
Permease protein of polyamine ABC transporter; COG1177 ABC-type spermidine/putrescine transport system, permease component II.
 
  0.797
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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