STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ24427.1Hypothetical protein; COG1233 Phytoene dehydrogenase and related proteins. (574 aa)    
Predicted Functional Partners:
EAQ23587.1
Hypothetical protein.
    
 0.836
EAQ26826.1
Hypothetical protein; COG0553 Superfamily II DNA/RNA helicases, SNF2 family.
    
 0.836
EAQ24426.1
Hypothetical protein; COG1283 Na+/phosphate symporter.
       0.773
EAQ24417.1
Acetylpolyamine aminohydrolase; COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
  
 0.770
EAQ24399.1
COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
  
 0.736
EAQ23346.1
Metallo-beta-lactamase family protein; COG1236 Predicted exonuclease of the beta-lactamase fold involved in RNA processing.
   
  0.732
EAQ27170.1
Putative ATP-dependent protease La, LON; COG2802 Uncharacterized protein, similar to the N-terminal domain of Lon protease.
    
  0.710
EAQ25294.1
COG0681 Signal peptidase I; Belongs to the peptidase S26 family.
     
  0.708
EAQ26033.1
Acetoin utilization protein AcuC; COG0123 Deacetylases, including yeast histone deacetylase and acetoin utilization protein.
   
 0.702
EAQ25663.1
D-isomer specific 2-hydroxyacid dehydrogenase family protein; COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases.
    
 0.658
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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