rnhB protein (Roseovarius sp. 217) - STRING interaction network

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rnhB

Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (206 aa)

Predicted Functional Partners:

EAQ24538.1

0.940

polA

0.937

recA

0.859

EAQ24325.1

0.856

EAQ23537.1

0.819

rpoC

0.812

EAQ25294.1

0.808

rnhA

0.798

EAQ24505.1

0.798

dnaQ

0.746

Your Current Organism:

Roseovarius sp. 217

NCBI taxonomy Id: 314264
Other names: R. sp. 217

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EAQ23537.1	rnhB	ROS217_16985	ROS217_09320	Formate dehydrogenase, beta subunit; COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit.	Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.819
EAQ23537.1	rpoC	ROS217_16985	ROS217_16675	Formate dehydrogenase, beta subunit; COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.495
EAQ24325.1	EAQ24505.1	ROS217_08745	ROS217_10137	COG0514 Superfamily II DNA helicase.	Bifunctional protein: Ribonuclease HI and DNA polymerase III, epsilon subunit; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.456
EAQ24325.1	EAQ24538.1	ROS217_08745	ROS217_10302	COG0514 Superfamily II DNA helicase.	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.955
EAQ24325.1	dnaQ	ROS217_08745	ROS217_09672	COG0514 Superfamily II DNA helicase.	Putative DNA polymerase III, epsilon subunit and related 3'-5'exonuclease; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.	0.868
EAQ24325.1	polA	ROS217_08745	ROS217_10002	COG0514 Superfamily II DNA helicase.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.971
EAQ24325.1	recA	ROS217_08745	ROS217_20887	COG0514 Superfamily II DNA helicase.	Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.914
EAQ24325.1	rnhA	ROS217_08745	ROS217_03930	COG0514 Superfamily II DNA helicase.	Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.456
EAQ24325.1	rnhB	ROS217_08745	ROS217_09320	COG0514 Superfamily II DNA helicase.	Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.856
EAQ24325.1	rpoC	ROS217_08745	ROS217_16675	COG0514 Superfamily II DNA helicase.	DNA-directed RNA polymerase beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.451
EAQ24505.1	EAQ24325.1	ROS217_10137	ROS217_08745	Bifunctional protein: Ribonuclease HI and DNA polymerase III, epsilon subunit; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	COG0514 Superfamily II DNA helicase.	0.456
EAQ24505.1	EAQ24538.1	ROS217_10137	ROS217_10302	Bifunctional protein: Ribonuclease HI and DNA polymerase III, epsilon subunit; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	0.517
EAQ24505.1	dnaQ	ROS217_10137	ROS217_09672	Bifunctional protein: Ribonuclease HI and DNA polymerase III, epsilon subunit; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	Putative DNA polymerase III, epsilon subunit and related 3'-5'exonuclease; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.	0.569
EAQ24505.1	polA	ROS217_10137	ROS217_10002	Bifunctional protein: Ribonuclease HI and DNA polymerase III, epsilon subunit; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.872
EAQ24505.1	rnhB	ROS217_10137	ROS217_09320	Bifunctional protein: Ribonuclease HI and DNA polymerase III, epsilon subunit; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.798
EAQ24538.1	EAQ24325.1	ROS217_10302	ROS217_08745	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	COG0514 Superfamily II DNA helicase.	0.955
EAQ24538.1	EAQ24505.1	ROS217_10302	ROS217_10137	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	Bifunctional protein: Ribonuclease HI and DNA polymerase III, epsilon subunit; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.	0.517
EAQ24538.1	dnaQ	ROS217_10302	ROS217_09672	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	Putative DNA polymerase III, epsilon subunit and related 3'-5'exonuclease; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.	0.966
EAQ24538.1	polA	ROS217_10302	ROS217_10002	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.994
EAQ24538.1	recA	ROS217_10302	ROS217_20887	DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]	Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.	0.941