Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAQ24468.1Hypothetical protein; COG0457 FOG: TPR repeat. (143 aa)    
Predicted Functional Partners:
EAQ24471.1
COG2010 Cytochrome c, mono- and diheme variants.
 
     0.910
EAQ24472.1
Sulfur oxidation molybdopterin C protein; COG2041 Sulfite oxidase and related enzymes.
 
     0.905
EAQ24473.1
Sulfur oxidation B protein; COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; Belongs to the 5'-nucleotidase family.
 
     0.878
EAQ24467.1
Lipocalin-related protein and Bos/Can/Equ allergen; COG2391 Predicted transporter component.
 
     0.875
EAQ24474.1
COG3258 Cytochrome c.
 
     0.860
EAQ24475.1
Sulfur oxidation Z protein.
 
     0.835
EAQ24476.1
Sulfur oxidation protein SoxY; COG5501 Predicted secreted protein.
 
     0.831
EAQ24477.1
COG2010 Cytochrome c, mono- and diheme variants.
 
     0.830
EAQ24469.1
Sulfur oxidation F protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases.
 
     0.816
EAQ24478.1
COG2143 Thioredoxin-related protein.
 
     0.813
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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