Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ24488.1Hypothetical protein; COG0477 Permeases of the major facilitator superfamily. (163 aa)    
Predicted Functional Partners:
EAQ24487.1
COG3333 Uncharacterized protein conserved in bacteria.
  
  
 0.870
EAQ24489.1
COG3181 Uncharacterized protein conserved in bacteria.
  
  
 0.753
EAQ24016.1
Hypothetical protein.
     
  0.635
EAQ25522.1
RecA protein; COG3181 Uncharacterized protein conserved in bacteria.
  
  
 0.460
EAQ23429.1
TctC protein; COG3181 Uncharacterized protein conserved in bacteria.
  
  
 0.460
EAQ26104.1
COG3181 Uncharacterized protein conserved in bacteria.
  
  
 0.460
EAQ26217.1
COG3181 Uncharacterized protein conserved in bacteria.
  
  
 0.460
EAQ24015.1
COG3181 Uncharacterized protein conserved in bacteria.
  
  
 0.460
EAQ26106.1
COG3333 Uncharacterized protein conserved in bacteria.
  
  
 0.452
EAQ25524.1
Integral membrane protein; COG3333 Uncharacterized protein conserved in bacteria.
  
  
 0.448
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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