Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ24489.1COG3181 Uncharacterized protein conserved in bacteria. (325 aa)    
Predicted Functional Partners:
EAQ24487.1
COG3333 Uncharacterized protein conserved in bacteria.
 
    0.934
EAQ24491.1
Hypothetical membrane protein; COG0730 Predicted permeases.
 
     0.846
EAQ24017.1
COG3333 Uncharacterized protein conserved in bacteria.
 
    0.846
EAQ26106.1
COG3333 Uncharacterized protein conserved in bacteria.
 
    0.844
EAQ25620.1
COG3333 Uncharacterized protein conserved in bacteria.
 
    0.843
EAQ23427.1
Tricarboxylic transport; COG3333 Uncharacterized protein conserved in bacteria.
 
    0.841
EAQ25524.1
Integral membrane protein; COG3333 Uncharacterized protein conserved in bacteria.
 
    0.839
EAQ26215.1
COG3333 Uncharacterized protein conserved in bacteria.
 
    0.824
EAQ24488.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
  
  
 0.753
EAQ24490.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.731
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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