Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ22837.1Putative membrane protein. (186 aa)    
Predicted Functional Partners:
EAQ22838.1
Probable DctM (C4-dicarboxylate permease, large subunit); COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
  0.970
EAQ22836.1
Probable DctP (periplasmic C4-dicarboxylate binding protein); COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
  0.943
EAQ22839.1
Hypothetical protein; COG5631 Predicted transcription regulator, contains HTH domain (MarR family).
 
     0.899
EAQ22871.1
TRAP dicarboxylate family transporter, DctM subunit; COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
  0.828
EAQ23662.1
Hypothetical protein; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
  
  
  0.764
EAQ26072.1
COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
   
  0.740
EAQ24169.1
TRAP dicarboxylate transporter, DctQ subunit; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
     
  0.714
EAQ23934.1
Putative transport protein; COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
 
  0.705
EAQ22840.1
Membrane protein, putative.
 
     0.692
EAQ23935.1
Hypothetical protein; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
  
  
  0.624
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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