STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ22839.1Hypothetical protein; COG5631 Predicted transcription regulator, contains HTH domain (MarR family). (146 aa)    
Predicted Functional Partners:
EAQ22837.1
Putative membrane protein.
 
     0.903
EAQ22836.1
Probable DctP (periplasmic C4-dicarboxylate binding protein); COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
     0.804
EAQ22840.1
Membrane protein, putative.
 
     0.765
EAQ22838.1
Probable DctM (C4-dicarboxylate permease, large subunit); COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
     0.706
EAQ24353.1
Hypothetical protein; COG1309 Transcriptional regulator.
  
     0.467
EAQ24502.1
5-oxoprolinase; COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit.
 
     0.451
EAQ24764.1
5-oxoprolinase (ATP-hydrolyzing); COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit.
 
     0.425
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.