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Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAQ22840.1Membrane protein, putative. (295 aa)    
Predicted Functional Partners:
EAQ22839.1
Hypothetical protein; COG5631 Predicted transcription regulator, contains HTH domain (MarR family).
 
     0.764
EAQ26213.1
Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases.
   
 
  0.728
EAQ25397.1
methylmalonyl-CoA epimerase; COG0346 Lactoylglutathione lyase and related lyases.
   
 
  0.708
EAQ22837.1
Putative membrane protein.
 
     0.692
EAQ22838.1
Probable DctM (C4-dicarboxylate permease, large subunit); COG1593 TRAP-type C4-dicarboxylate transport system, large permease component.
 
     0.567
EAQ22836.1
Probable DctP (periplasmic C4-dicarboxylate binding protein); COG1638 TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
     0.534
EAQ25794.1
Probable serine/threonine protein kinase.
  
     0.490
EAQ25212.1
Hypothetical protein.
  
     0.469
EAQ23166.1
Transcriptional regulator/arsenate reductase; COG0640 Predicted transcriptional regulators; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
   
 0.420
EAQ25692.1
Oxidoreductase, Gfo/Idh/MocA family protein; COG0673 Predicted dehydrogenases and related proteins.
 
   0.418
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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