Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ24628.1TRAP-T family transporter, DctM (12 TMs) subunit; COG4664 TRAP-type mannitol/chloroaromatic compound transport system, large permease component. (472 aa)    
Predicted Functional Partners:
EAQ24629.1
TRAP-T family transporter, small (4 TMs) inner membrane subunit; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
 
  0.958
EAQ24627.1
COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases.
 
     0.909
EAQ24630.1
TRAP-T family transporter, periplasmic binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
    0.899
EAQ23866.1
COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
 
  0.799
EAQ24625.1
COG1052 Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
    0.795
EAQ23800.1
Hypothetical protein; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
 
  0.766
EAQ24639.1
C4-dicarboxylate transporter family protein, DctQ subunit; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
 
  0.763
EAQ23104.1
Extracellular solute-binding protein, family 7; COG4663 TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component.
 
    0.750
EAQ24626.1
Hypothetical protein.
       0.745
EAQ24638.1
TRAP dicarboxylate transporter- DctP subunit; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.
 
    0.738
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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