STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ24241.1Hypothetical protein; COG0510 Predicted choline kinase involved in LPS biosynthesis. (102 aa)    
Predicted Functional Partners:
EAQ24433.1
Thiamine-phosphate pyrophosphorylase; COG0352 Thiamine monophosphate synthase.
     
 0.814
EAQ26724.1
Thiamine-phosphate pyrophosphorylase, putative; COG0352 Thiamine monophosphate synthase.
     
 0.814
rsgA
Hypothetical protein; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.
    
  0.797
EAQ24430.1
TENA/THI-4 family protein; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family.
   
 
  0.684
EAQ23563.1
Endonuclease.
    
 0.652
EAQ24437.1
COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.
     
 0.577
EAQ25255.1
COG0584 Glycerophosphoryl diester phosphodiesterase.
    
 0.570
EAQ24240.1
Hypothetical protein.
       0.565
EAQ23517.1
COG3409 Putative peptidoglycan-binding domain-containing protein.
  
     0.520
EAQ24239.1
Hypothetical protein.
       0.501
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.