STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpmI50S ribosomal protein L35. (74 aa)    
Predicted Functional Partners:
EAQ24272.1
COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family.
       0.801
rpmI-2
COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.
     
 0.707
EAQ26783.1
Tellurite resistance protein; COG0422 Thiamine biosynthesis protein ThiC.
  
     0.706
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
     
 0.694
EAQ24387.1
Lipoprotein, putative; COG2812 DNA polymerase III, gamma/tau subunits.
  
     0.646
EAQ24031.1
Hypothetical protein.
  
     0.645
EAQ24030.1
Hypothetical protein.
  
     0.619
EAQ26325.1
Hypothetical protein.
  
     0.617
EAQ26955.1
Hypothetical protein.
  
     0.605
EAQ26307.1
Membrane protein, putative.
  
     0.583
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.