STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ22950.1N-carbamoyl-L-amino acid amidohydrolase; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases. (416 aa)    
Predicted Functional Partners:
EAQ22949.1
Dihydropyrimidinase; COG0044 Dihydroorotase and related cyclic amidohydrolases.
 
 
 0.993
EAQ25429.1
COG0167 Dihydroorotate dehydrogenase.
 
 0.942
EAQ25430.1
COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
 
 
  0.886
EAQ22951.1
Transcriptional regulator, TetR family protein; COG1309 Transcriptional regulator.
 
     0.761
EAQ23421.1
Polysaccharide deacetylase family protein; COG0726 Predicted xylanase/chitin deacetylase.
  
 0.700
EAQ25026.1
Possible polysaccharide deacetylase; COG0726 Predicted xylanase/chitin deacetylase.
 
  
 0.686
EAQ25985.1
malonyl-CoA synthase; COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
   
 
  0.678
EAQ24512.1
COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
  
 
  0.659
EAQ22945.1
ABC transporter, periplasmic substrate-binding protein; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components.
 
     0.651
EAQ25651.1
COG1145 Ferredoxin.
  
 
  0.641
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.