Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ25975.1Hypothetical protein. (172 aa)    
Predicted Functional Partners:
EAQ25974.1
COG5501 Predicted secreted protein.
 
     0.952
EAQ22961.1
Hypothetical protein; COG3383 Uncharacterized anaerobic dehydrogenase.
 
     0.799
EAQ25434.1
Hypothetical protein; COG0151 Phosphoribosylamine-glycine ligase.
 
     0.779
EAQ25971.1
COG2010 Cytochrome c, mono- and diheme variants.
 
     0.771
EAQ25972.1
Putative methanol oxidation protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
     0.768
EAQ25432.1
COG5501 Predicted secreted protein.
 
     0.758
EAQ25973.1
Hypothetical protein; COG0607 Rhodanese-related sulfurtransferase.
  
     0.758
EAQ25433.1
Hypothetical protein.
  
     0.753
EAQ25435.1
Hypothetical protein.
  
     0.687
EAQ22963.1
Putative methanol dehydrogenase protein, large subunit; COG4993 Glucose dehydrogenase.
  
     0.667
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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