Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ25992.1Hypothetical protein. (390 aa)    
Predicted Functional Partners:
EAQ25993.1
COG0642 Signal transduction histidine kinase.
 
 
  0.962
EAQ25991.1
Two component transcriptional regulator, LuxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
    0.899
EAQ25989.1
Putative ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
 
    0.762
EAQ25990.1
Efflux ABC transporter, permease protein; COG0842 ABC-type multidrug transport system, permease component.
 
     0.756
EAQ25986.1
Hypothetical protein.
 
     0.747
EAQ25987.1
Hypothetical protein.
 
     0.744
EAQ25988.1
Hypothetical protein.
 
     0.706
EAQ24336.1
Sensor histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
  
 
 0.629
EAQ24311.1
Diguanylate cyclase, putative; COG2199 FOG: GGDEF domain.
  
 
 0.614
EAQ23790.1
COG0642 Signal transduction histidine kinase.
 
 0.610
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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