Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EAQ26065.1 | EAQ26066.1 | ROS217_12851 | ROS217_12856 | Transposase IS2020, hypothetical; COG3316 Transposase and inactivated derivatives. | Hypothetical protein. | 0.592 |
EAQ26065.1 | EAQ26067.1 | ROS217_12851 | ROS217_12861 | Transposase IS2020, hypothetical; COG3316 Transposase and inactivated derivatives. | Hypothetical protein. | 0.413 |
EAQ26066.1 | EAQ26065.1 | ROS217_12856 | ROS217_12851 | Hypothetical protein. | Transposase IS2020, hypothetical; COG3316 Transposase and inactivated derivatives. | 0.592 |
EAQ26066.1 | EAQ26067.1 | ROS217_12856 | ROS217_12861 | Hypothetical protein. | Hypothetical protein. | 0.524 |
EAQ26066.1 | dnaK | ROS217_12856 | ROS217_10427 | Hypothetical protein. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.648 |
EAQ26066.1 | polA | ROS217_12856 | ROS217_10002 | Hypothetical protein. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.439 |
EAQ26067.1 | EAQ26065.1 | ROS217_12861 | ROS217_12851 | Hypothetical protein. | Transposase IS2020, hypothetical; COG3316 Transposase and inactivated derivatives. | 0.413 |
EAQ26067.1 | EAQ26066.1 | ROS217_12861 | ROS217_12856 | Hypothetical protein. | Hypothetical protein. | 0.524 |
dnaK | EAQ26066.1 | ROS217_10427 | ROS217_12856 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | Hypothetical protein. | 0.648 |
dnaK | polA | ROS217_10427 | ROS217_10002 | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.663 |
polA | EAQ26066.1 | ROS217_10002 | ROS217_12856 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Hypothetical protein. | 0.439 |
polA | dnaK | ROS217_10002 | ROS217_10427 | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.663 |