Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ26133.12-dehydro-3-deoxygalactonokinase, putative; COG3734 2-keto-3-deoxy-galactonokinase. (246 aa)    
Predicted Functional Partners:
EAQ23946.1
Mandelate racemase/muconate lactonizing enzyme family protein; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
 
 0.850
EAQ26132.1
COG3453 Uncharacterized protein conserved in bacteria.
       0.773
EAQ25546.1
Mandelate racemase/muconate lactonizing enzyme family protein; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
  
 
 0.717
EAQ27411.1
Hypothetical protein; COG1760 L-serine deaminase.
  
     0.701
EAQ26491.1
Hypothetical protein.
  
     0.618
EAQ27253.1
Lipoprotein, putative.
  
     0.538
EAQ25664.1
Hypothetical protein.
  
     0.516
EAQ24444.1
Hypothetical protein.
  
     0.464
EAQ26494.1
COG5488 Integral membrane protein.
  
     0.464
EAQ27267.1
OmpA domain protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
     0.455
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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