Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ26215.1COG3333 Uncharacterized protein conserved in bacteria. (502 aa)    
Predicted Functional Partners:
EAQ26217.1
COG3181 Uncharacterized protein conserved in bacteria.
 
    0.925
EAQ26216.1
Hypothetical protein.
 
     0.887
EAQ26104.1
COG3181 Uncharacterized protein conserved in bacteria.
 
    0.856
EAQ25522.1
RecA protein; COG3181 Uncharacterized protein conserved in bacteria.
    0.852
EAQ24015.1
COG3181 Uncharacterized protein conserved in bacteria.
 
    0.851
EAQ23429.1
TctC protein; COG3181 Uncharacterized protein conserved in bacteria.
 
    0.840
EAQ26213.1
Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases.
 
     0.838
EAQ24489.1
COG3181 Uncharacterized protein conserved in bacteria.
 
    0.824
EAQ26214.1
COG0169 Shikimate 5-dehydrogenase.
 
     0.824
EAQ26207.1
3-carboxy-cis,cis-muconate cycloisomerase; COG0015 Adenylosuccinate lyase.
       0.773
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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