Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
EAQ26218.1Hypothetical protein; COG1309 Transcriptional regulator. (230 aa)    
Predicted Functional Partners:
EAQ26213.1
Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases.
 
     0.775
EAQ26217.1
COG3181 Uncharacterized protein conserved in bacteria.
 
     0.635
EAQ26216.1
Hypothetical protein.
 
     0.580
EAQ26210.1
COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
     0.472
EAQ26211.1
COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
     0.469
EAQ26207.1
3-carboxy-cis,cis-muconate cycloisomerase; COG0015 Adenylosuccinate lyase.
 
     0.446
EAQ26212.1
4-carboxymuconolactone decarboxylase; COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit.
 
     0.442
EAQ26214.1
COG0169 Shikimate 5-dehydrogenase.
 
     0.440
EAQ26208.1
PcaL, 3-oxoadipate enol-lactone hydrolase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).
 
     0.438
EAQ23012.1
Ferredoxin/Oxidoreductase FAD/NAD(P)-binding; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
  
 
 0.417
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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