STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ26222.1Hypothetical protein; COG0628 Predicted permease. (351 aa)    
Predicted Functional Partners:
EAQ26223.1
Crp-Fnr family transciptional regulator; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.
 
    0.806
atpE
ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
     
  0.684
EAQ26228.1
Two-component response regulator; COG0784 FOG: CheY-like receiver.
  
     0.547
EAQ26219.1
COG3861 Uncharacterized protein conserved in bacteria.
 
     0.531
EAQ26221.1
Phospholipase D/Transphosphatidylase; COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes.
 
     0.504
EAQ23179.1
COG4325 Predicted membrane protein.
  
     0.477
EAQ26231.1
Periplasmic sensor signal transduction histidine kinase; COG0840 Methyl-accepting chemotaxis protein.
  
     0.453
EAQ26224.1
Hypothetical protein; COG0063 Predicted sugar kinase.
       0.445
EAQ26227.1
COG5487 Small integral membrane protein.
 
     0.416
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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