Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ26269.1Hypothetical protein. (129 aa)    
Predicted Functional Partners:
EAQ26270.1
Hydrolase, NUDIX family protein; COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes.
 
     0.845
EAQ25308.1
SURF1 family protein.
 
     0.661
EAQ25144.1
Hydrolase, alpha/beta fold family protein; COG2267 Lysophospholipase.
  
     0.619
EAQ26494.1
COG5488 Integral membrane protein.
  
     0.587
EAQ26268.1
COG5126 Ca2+-binding protein (EF-Hand superfamily).
       0.586
EAQ26267.1
RNA polymerase sigma-70 factor, ECF family protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
       0.578
ctaG
Cytochrome C oxidase assembly protein; Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I; Belongs to the COX11/CtaG family.
 
     0.575
EAQ26266.1
Hypothetical protein.
 
     0.563
EAQ25309.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
 
     0.524
EAQ24644.1
HemY domain protein; COG3071 Uncharacterized enzyme of heme biosynthesis.
  
     0.517
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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