STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ26315.1COG2148 Sugar transferases involved in lipopolysaccharide synthesis. (229 aa)    
Predicted Functional Partners:
EAQ25920.1
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
 
 
 0.961
EAQ25821.1
Mannose-6-phosphate isomerase; COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.959
EAQ25691.1
Exopolysaccharide biosynthesis domain protein; COG0489 ATPases involved in chromosome partitioning.
 
 
 0.784
EAQ25591.1
Exopolysaccharide biosynthesis domain protein; COG0489 ATPases involved in chromosome partitioning.
 
 
 0.758
gmd
NAD-dependent epimerase/dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
  
  
 0.710
EAQ25063.1
Nucleotide sugar epimerase/dehydratase; COG1086 Predicted nucleoside-diphosphate sugar epimerases.
 
 
 0.710
EAQ26316.1
Membrane protein, putative.
 
 
 0.681
EAQ25928.1
Hypothetical outer membrane protein, OMA family protein; Similar to Wza; COG1596 Periplasmic protein involved in polysaccharide export.
 
 
 0.636
EAQ26317.1
Glycosyl transferase, group 1 family protein; COG0438 Glycosyltransferase.
 
 
 0.620
EAQ23597.1
COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
 
 0.615
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
Server load: medium (78%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.