Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ26325.1Hypothetical protein. (329 aa)    
Predicted Functional Partners:
EAQ26326.1
Hypothetical protein; COG0825 Acetyl-CoA carboxylase alpha subunit.
 
    0.821
EAQ23517.1
COG3409 Putative peptidoglycan-binding domain-containing protein.
  
     0.756
EAQ24609.1
core-2/I-branching enzyme family protein.
  
     0.744
EAQ24030.1
Hypothetical protein.
  
     0.740
EAQ26348.1
Flagellar motor protein; COG0419 ATPase involved in DNA repair.
   
 0.734
EAQ24962.1
OmpA family protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
 
  0.729
EAQ24031.1
Hypothetical protein.
  
     0.724
EAQ26307.1
Membrane protein, putative.
  
     0.713
EAQ24560.1
OmpA domain protein; COG0226 ABC-type phosphate transport system, periplasmic component.
 
 
 0.707
EAQ25200.1
COG1596 Periplasmic protein involved in polysaccharide export.
  
  
  0.701
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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