Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ26352.1Hypothetical protein; COG0500 SAM-dependent methyltransferases. (246 aa)    
Predicted Functional Partners:
EAQ25686.1
Non-ribosomal peptide synthase; COG3321 Polyketide synthase modules and related proteins.
   
 0.890
EAQ25688.1
Non-ribosomal peptide synthetase; COG0223 Methionyl-tRNA formyltransferase.
    
 0.864
EAQ24644.1
HemY domain protein; COG3071 Uncharacterized enzyme of heme biosynthesis.
  
     0.738
gloB
Putative hydroxyacylglutathione hydrolase (glyoxalase II) (GLX II) protein; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
     
 0.736
EAQ23508.1
DNA-binding protein, putative; COG1396 Predicted transcriptional regulators.
  
     0.700
EAQ27085.1
HAD-superfamily subfamily IIA hydrolase; COG0647 Predicted sugar phosphatases of the HAD superfamily.
  
  
  0.695
EAQ24661.1
HD domain protein; COG1896 Predicted hydrolases of HD superfamily.
  
     0.670
EAQ27111.1
Hypothetical protein; COG1562 Phytoene/squalene synthetase.
  
  
 0.666
EAQ24380.1
Hypothetical protein.
  
     0.652
EAQ26472.1
Hypothetical protein; COG1396 Predicted transcriptional regulators.
  
     0.626
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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