STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ23926.1Probable NreB protein; COG0477 Permeases of the major facilitator superfamily. (439 aa)    
Predicted Functional Partners:
EAQ23927.1
COG1937 Uncharacterized protein conserved in bacteria.
 
     0.874
EAQ23929.1
Hypothetical protein; Similar to ORF2 in GenBank Accession Number L31491.
 
     0.633
EAQ22989.1
Hypothetical protein; Similar to ORF2 in GenBank Accession Number L31391.
 
     0.624
EAQ22992.1
COG1937 Uncharacterized protein conserved in bacteria.
 
     0.568
EAQ22990.1
Putative ORF1; COG0477 Permeases of the major facilitator superfamily.
 
     0.527
EAQ23928.1
Putative ORF1; COG0477 Permeases of the major facilitator superfamily.
 
     0.511
EAQ24198.1
COG4786 Flagellar basal body rod protein; Belongs to the flagella basal body rod proteins family.
    
   0.473
EAQ23925.1
Hypothetical protein; COG2931 RTX toxins and related Ca2+-binding proteins.
       0.462
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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