STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ24010.1Regulatory protein GntR, HTH:GntR, C-terminal; COG1802 Transcriptional regulators. (234 aa)    
Predicted Functional Partners:
EAQ24011.1
Hypothetical protein; COG0028 Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]; Belongs to the TPP enzyme family.
 
     0.792
frc
Formyl-coenzyme A transferase; Involved in the catabolism of oxalate and in the adapatation to low pH via the induction of the oxalate-dependent acid tolerance response (ATR). Catalyzes the transfer of the CoA moiety from formyl- CoA to oxalate; Belongs to the CoA-transferase III family. Frc subfamily.
 
     0.737
EAQ27460.1
Transcriptional regulator, GntR family protein; COG1802 Transcriptional regulators.
  
     0.732
EAQ27260.1
Transcriptional regulator, GntR family protein; COG1802 Transcriptional regulators.
  
     0.678
EAQ24013.1
COG0223 Methionyl-tRNA formyltransferase.
 
     0.602
EAQ24014.1
COG0589 Universal stress protein UspA and related nucleotide-binding proteins.
 
     0.534
EAQ25003.1
Transcriptional regulator, GntR family protein; COG1802 Transcriptional regulators.
  
     0.495
EAQ25023.1
Transcriptional regulator, GntR family protein; COG1802 Transcriptional regulators.
  
     0.452
prmC
Putative methylase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.
    
   0.426
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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