Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ24041.1Immunogenic protein; COG2358 TRAP-type uncharacterized transport system, periplasmic component. (322 aa)    
Predicted Functional Partners:
EAQ24039.1
Transporter; COG4666 TRAP-type uncharacterized transport system, fused permease components.
 
    0.930
EAQ24037.1
Putative membrane protein; COG4666 TRAP-type uncharacterized transport system, fused permease components.
 
    0.890
EAQ26847.1
TRAP-T family transporter, fused inner membrane subunits; COG4666 TRAP-type uncharacterized transport system, fused permease components.
 
    0.854
EAQ24042.1
COG3741 N-formylglutamate amidohydrolase.
       0.723
EAQ24040.1
Hypothetical protein.
  
    0.573
EAQ24043.1
Formiminoglutamate deiminase; COG0402 Cytosine deaminase and related metal-dependent hydrolases.
       0.519
EAQ24044.1
Transcriptional regulator, GntR family protein; COG2188 Transcriptional regulators.
       0.519
EAQ24038.1
Outer membrane protein, hypothetical; COG2358 TRAP-type uncharacterized transport system, periplasmic component.
 
    
0.458
EAQ22881.1
COG3090 TRAP-type C4-dicarboxylate transport system, small permease component.
  
     0.433
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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