STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ23186.1Transcriptional regulator, LuxR family/hydrolase, alpha/beta fold family protein; COG2771 DNA-binding HTH domain-containing proteins. (595 aa)    
Predicted Functional Partners:
EAQ27445.1
Two-component hybrid sensor and regulator; COG0642 Signal transduction histidine kinase.
   
 0.761
EAQ26608.1
Sensory box histidine kinase/response regulator; COG5002 Signal transduction histidine kinase.
   
 0.748
EAQ25811.1
Hypothetical protein; COG0500 SAM-dependent methyltransferases.
 
  
 0.729
EAQ26860.1
Phosphopantetheine attachment site protein; COG0236 Acyl carrier protein.
 
 0.688
EAQ26875.1
DAG-kinase catalytic domain protein; COG1597 Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase.
 
  
  0.650
EAQ25688.1
Non-ribosomal peptide synthetase; COG0223 Methionyl-tRNA formyltransferase.
  
 
 0.638
EAQ23997.1
Nitrate/nitrite regulatory protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
 0.634
EAQ23561.1
RNA polymerase sigma subunit; COG0666 FOG: Ankyrin repeat; Belongs to the sigma-70 factor family.
  
 0.633
EAQ25686.1
Non-ribosomal peptide synthase; COG3321 Polyketide synthase modules and related proteins.
  
 
 0.618
EAQ26877.1
Putative sulfotransferase protein.
  
 
   0.606
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.