STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ23008.1COG3750 Uncharacterized protein conserved in bacteria. (86 aa)    
Predicted Functional Partners:
EAQ23007.1
Hypothetical protein.
 
     0.785
EAQ26774.1
COG3814 Uncharacterized protein conserved in bacteria.
  
   
 0.783
EAQ26012.1
COG3820 Uncharacterized protein conserved in bacteria.
  
   
 0.765
recO
DNA repair protein RecO; Involved in DNA repair and RecF pathway recombination.
  
     0.751
EAQ23984.1
COG2927 DNA polymerase III, chi subunit.
  
     0.733
EAQ27042.1
COG2913 Small protein A (tmRNA-binding).
  
   
 0.685
atpF-2
FoF1 ATP synthase, subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.
  
     0.680
EAQ23559.1
COG3807 Uncharacterized protein conserved in bacteria.
  
     0.658
EAQ25451.1
Hypothetical protein.
  
     0.630
EAQ24516.1
COG0625 Glutathione S-transferase.
  
     0.625
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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