Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ23533.1Hypothetical protein. (299 aa)    
Predicted Functional Partners:
EAQ23532.1
COG3853 Uncharacterized protein involved in tellurite resistance; Belongs to the TelA family.
 
  
 0.982
EAQ23531.1
Lipoprotein, putative.
 
     0.916
EAQ23528.1
COG4260 Putative virion core protein (lumpy skin disease virus).
 
     0.773
EAQ23534.1
Hypothetical protein.
       0.773
EAQ23526.1
Hypothetical protein.
 
     0.770
EAQ27075.1
RDD family protein; COG2252 Permeases.
 
     0.718
EAQ23530.1
Hypothetical protein.
       0.662
EAQ25350.1
COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family.
     
 0.644
EAQ25398.1
COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.
  
     0.642
EAQ27127.1
Hypothetical protein; COG0753 Catalase.
  
     0.633
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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