Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ25103.1COG2366 Protein related to penicillin acylase. (825 aa)    
Predicted Functional Partners:
EAQ23310.1
Putative penicillin acylase (penicillin amidase); COG2366 Protein related to penicillin acylase.
  
  
 
0.705
EAQ27184.1
Hypothetical protein.
  
     0.691
EAQ26416.1
COG2367 Beta-lactamase class A.
     
  0.646
EAQ25104.1
6-phosphogluconate dehydrogenase domain protein; COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases.
       0.582
EAQ27191.1
COG1426 Uncharacterized protein conserved in bacteria.
  
     0.545
EAQ25102.1
Hypothetical protein.
       0.532
EAQ24035.1
COG3159 Uncharacterized protein conserved in bacteria.
  
     0.529
EAQ27266.1
Hypothetical protein; COG0711 F0F1-type ATP synthase, subunit b.
  
     0.504
EAQ24204.1
Hypothetical protein.
  
     0.499
EAQ26284.1
Hypothetical protein; COG1466 DNA polymerase III, delta subunit.
  
     0.488
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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