Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ25120.1Hypothetical protein. (199 aa)    
Predicted Functional Partners:
EAQ25121.1
Head-tail adaptor, putative.
 
 
 0.995
EAQ25123.1
Major tail protein, TP901-1 family protein; COG5437 Predicted secreted protein.
 
   0.992
EAQ25122.1
Hypothetical protein.
 
 
   0.991
EAQ25127.1
Hypothetical protein.
 
 
   0.987
EAQ25128.1
Hypothetical protein.
 
 
   0.987
EAQ25116.1
Portal protein, HK97 family protein; COG4695 Phage-related protein.
 
   0.979
EAQ25126.1
COG5281 Phage-related minor tail protein.
 
 
   0.975
EAQ25119.1
COG4653 Predicted phage phi-C31 gp36 major capsid-like protein.
 
 
 0.974
EAQ25124.1
Hypothetical protein.
 
    0.954
EAQ25129.1
Hypothetical protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
 
     0.946
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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