STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EAQ22820.1Hypothetical protein; COG0272 NAD-dependent DNA ligase (contains BRCT domain type II). (165 aa)    
Predicted Functional Partners:
EAQ27178.1
Hypothetical protein.
  
 
  0.827
EAQ27164.1
Hypothetical protein.
  
 
   0.701
EAQ25483.1
MJ0042 family finger-like domain protein.
  
     0.672
EAQ26307.1
Membrane protein, putative.
  
     0.669
EAQ24609.1
core-2/I-branching enzyme family protein.
  
     0.659
EAQ24559.1
Hypothetical protein.
  
     0.622
EAQ23107.1
Type I secretion target repeat protein.
  
 
  0.603
EAQ27186.1
Hypothetical protein; COG1530 Ribonucleases G and E.
  
     0.598
EAQ24030.1
Hypothetical protein.
  
     0.578
EAQ25378.1
Hypothetical protein.
  
     0.572
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.