Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EAQ26646.1DNA-binding protein, putative; COG1396 Predicted transcriptional regulators. (215 aa)    
Predicted Functional Partners:
EAQ26638.1
FwdC/FmdC family protein; COG0070 Glutamate synthase domain 3.
 
     0.818
EAQ26639.1
Glutamine amidotransferase, class II; COG0067 Glutamate synthase domain 1.
 
     0.818
EAQ24242.1
Cyclase family protein; COG1878 Predicted metal-dependent hydrolase.
  
    0.817
EAQ26637.1
COG0069 Glutamate synthase domain 2; Belongs to the glutamate synthase family.
 
     0.785
EAQ26636.1
COG0174 Glutamine synthetase.
 
    0.757
EAQ26647.1
Transcriptional regulator, AraC family protein; COG4977 Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain.
 
    0.657
EAQ26650.1
COG4311 Sarcosine oxidase delta subunit.
 
     0.619
EAQ26648.1
COG4583 Sarcosine oxidase gamma subunit.
 
     0.604
EAQ26649.1
Sarcosine oxidase, alpha subunit family protein; COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Belongs to the GcvT family.
 
   
 0.572
EAQ26645.1
Hypothetical protein.
  
     0.569
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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