Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EAQ26741.1Hypothetical protein. (494 aa)    
Predicted Functional Partners:
EAQ26742.1
Hypothetical protein.
 
     0.806
xerC-2
Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
       0.782
EAQ27266.1
Hypothetical protein; COG0711 F0F1-type ATP synthase, subunit b.
  
     0.768
EAQ27253.1
Lipoprotein, putative.
  
     0.761
EAQ24046.1
Hypothetical protein.
  
     0.758
EAQ25837.1
Rhomboid family protein; COG0705 Uncharacterized membrane protein (homolog of Drosophila rhomboid).
 
     0.757
EAQ27191.1
COG1426 Uncharacterized protein conserved in bacteria.
  
     0.747
EAQ26491.1
Hypothetical protein.
  
     0.729
EAQ25664.1
Hypothetical protein.
  
     0.713
EAQ25074.1
Hypothetical protein.
  
     0.709
Your Current Organism:
Roseovarius sp. 217
NCBI taxonomy Id: 314264
Other names: R. sp. 217
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